Shandre Pillay - IUIS Beijing ICI 2019 Presentation
Shandre Pillay - The effect of long non-coding RNA-125 on mouse and human macrophage polarization during Mycobacterium tuberculosis infection
Tuberculosis is one of the leading fatal infectious diseases world-wide and also accounting for significant morbidity especially in developing countries. The bacteria responsible for this disease, Mycobacterium tuberculosis (Mtb), can subvert the host defence by skewing macrophage activation towards a less microbicidal alternative activated state to avoid classical effector killing functions. Amongst those host factors, long non-coding RNAs (lncRNAs) are emerging as important regulators of immune cells activation and response to pathogens. In collaboration the RIKEN Omics Science Center, Japan, we performed CAGE genome-wide transcriptome analysis of IFN-ϒ and IL-4/13 stimulated macrophages. We have identified 151 differentially expressed long non-coding RNAs (lncRNAs) that might play functional roles in macrophage polarization. In particular, lncRNA-125 was significantly downregulated during Mtb infection. This project aims at functionally validating lncRNA-125 in polarized and/or Mtb-infected murine and human macrophages using chemically engineered antisense oligonucleotides, hence identifying lncRNAs, particularly lncRNA-125, as new host factors to be further investigated for TB diagnostics and therapies.